Web-based Software Identifies Unique Mesothelioma Gene Mutations
On Monday, the National Center for Genome Resources announced the release of the first web-based software program that analyzes and sequences high volumes of DNA. The program, Alpheus, will enable scientists to obtain meaningful data from massive DNA-sequencing projects.
Researchers at Brigham and Women’s Hospital have already implemented the program to find the unique genetic make-up of tumors in cancer patients. There,
Alpheus was used to uncover the sequence of DNA in four mesothelioma patients. The results were astounding; the software detected 15 new genetic mutations and each tumor was found to have its own unique mutation profile.
The software expedites cancer analysis by examining massive amounts of DNA very rapidly. What does this mean for patients? The software presents the potential for highly refined treatment; understanding specific mutations can help doctors recommend therapies on an individual basis.
“One truly encouraging aspect of our findings is after spending a year and a half to develop the methodology and software for the pipeline, new tumors can be analyzed over the course of about a month," said David Sugarbaker, chief of the Division of Thoracic Surgery at BWH, and lead author of the study on Alpheus. "Knowing which genes are mutated opens the door to better understanding and the discovery of more targeted and effective patient-specific treatments in real time."
